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test fisher exact
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2.7k
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Please help with workspace error in R
R
test fisher exact
workspace
updated 7.2 years ago by
Aaron Lun
★ 29k • written 7.2 years ago by
Sara
▴ 20
2
votes
10
replies
2.2k
views
How to get DE relative to a fold-change threshold in single factor experiments
edgeR
deanalysis
test fisher exact
updated 7.9 years ago by
Aaron Lun
★ 29k • written 7.9 years ago by
thkapell
▴ 10
2
votes
2
replies
1.6k
views
Collapse FDR value of probes detecting the same gene
test fisher exact
EmpiricalBrownsMethod
affy
updated 9.9 years ago by
Gordon Smyth
53k • written 9.9 years ago by
tofukaj
• 0
3
votes
5
replies
3.5k
views
How to do simple Fisher' exact test for overlapped genomic interval in R?
test fisher exact
r
findoverlapsofpeaks
written 10.1 years ago by
Jurat Shahidin
▴ 80
0
votes
4
replies
2.1k
views
fisher exact snp
test fisher exact
11.3 years ago
sleidymagaly
• 0
5 results • Page
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Answer: Subsetting data verses contrasts [DESeq2]?
by
ATpoint
★ 5.0k
This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …
Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you so much for your help! will try to proceed with the suggestion
Comment: GSEA in R/Bioconductor course
by
a2a2haa
• 0
Academic researchers often share their breakthroughs and course updates through visual stories, making it essential to have tools that pres…
Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…
Answer: Bulk RNAseq analysis for
by
Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Votes
Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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